Comparing Bayesian-Based Reconstruction Strategies in Topology-Based Pathway Enrichment Analysis
Biomolecules
Yajunzi Wang, Jing Li, Daiyun Huang, Yang Hao, Bo Li, Kai Wang, Boya Chen, Ting Li and Xin Liu
Xi’an Jiaotong-Liverpool University
2022-08-08
2
. Geographical distribution of trace elements (selenium, zinc, iron, copper) and case fatality rate of COVID-19: A national analysis across conterminous USA.
Comparative differences in musculoskeletal pain consultation and analgesic prescription for people with dementia: a UK wide matched cohort study.
Pain
Laurna Bullock, John Bedson, Ying Chen, Carolyn A Chew-Graham, Paul Campbell
Keele University
2021-11-11
4
Probing the Intracellular Delivery of Nanoparticles into Hard-to-Transfect Cells
ACS NANO
Xuan Yang, Xiaowei Wen, Jie Dai, Yanming Chen, Wanchuan Ding, Jun Wang, Xiang Gu, Xuejin Zhang, Jin Chen, Roy L. Sutliff, Steven R. Emory, and Gang Ruan
Nanjing University
2022-06-28
5
Src family kinases activity is required for transmitting purinergic P2X7 receptor signaling in cortical spreading depression and neuroinflammation
JOURNAL OF HEADACHE AND PAIN
Lingdi Nie, Dongqing Ma, John P. Quinn and Minyan Wang
Xian Jiaotong Liverpool Univ XJTLU
2021-12
6
TRPA1-Mediated Src Family Kinases Activity Facilitates Cortical Spreading Depression Susceptibility and Trigeminovascular System Sensitization
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES
Lingdi Nie, Liwen Jiang, John P. Quinn, Blair. Grubb and Minyan Wang
Xi’an Jiaotong-Liverpool University
2021-11
7
m6AmPred: Identifying RNA N6, 2 ‘-O-dimethyladenosine (m(6)A(m)) sites based on sequence-derived information
METHODS
Jie Jiang, Bowen Song, Kunqi Chen, Zhiliang Lu, Rong Rong, Yu Zhong, Jia Meng
Xi’an Jiaotong-Liverpool University
2022-07
8
M6A-Atlas: A comprehensive knowledgebase for unraveling the N6-methyladenosine (m6A) epitranscriptome
Nucleic Acids Research
Yujiao Tang, Kunqi Chen, Bowen Song, Jiongming Ma, Xiangyu Wu, Qingru Xu, Zhen Wei, Jionglong Su, Gang Liu, Rong Rong, Zhiliang Lu, Jo˜ao Pedro de Magalh˜aes, Daniel J. Rigden and Jia Meng
Xi’An Jiaotong-Liverpool University
2021
9
Bioinformatics approaches for deciphering the epitranscriptome: Recent progress and emerging topics
COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
Lian Liu, Bowen Song, Jiani Ma, Yi Song, Song-Yao Zhang , Yujiao Tang , Xiangyu Wu, Zhen Wei, Kunqi Chen, Jionglong Su, Rong Rong, Zhiliang Lu, João Pedro de Magalhães, Daniel J. Rigden, Lin Zhang, Shao-Wu Zhang, Yufei Huang, Xiujuan Lei, Hui Liu, Jia Meng
Shaanxi Normal University
2020
10
Hepatitis B virus X protein counteracts high mobility group box 1 protein-mediated epigenetic silencing of covalently closed circular DNA
PLOS Pathogens
Elena S. Kim, Jun Zhou, Hu Zhang, Alexander Marchetti, Maarten van de Klundert, Dawei Cai, Xiaoyang Yu, Bidisha Mitra, Yuanjie Liu, Mu Wang, Ulrike Protzer, Haitao Guo
Univ Pittsburgh, UPMC Hillman Canc Ctr, Dept Microbiol & Mol Genet, Canc Virol Program,Sch Med, Pittsburgh, PA 15260 USA
2022-08-12
11
Targeting SOD1 via RNAi with PEGylated graphene oxide nanoparticles in platinum-resistant ovarian cancer
Cancer Gene Therapy
Attila Szénási, Enakshi Sivasudhan, Hong Du, Peizhuo Zhang, Jie Huang, Zhijun Zhang, Sonia Rocha and Mu Wang
Xi’an Jiaotong-Liverpool University
2023
12
Flavonifractor plautii Protects Against Elevated Arterial Stiffness. Circulation Research
Circulation Research
Shiyun Luo, Yawen Zhao, Shanshan Zhu, Ludi Liu, Ken Cheng, Bingqi Ye, Yueyuan Han , Jiahua Fan , Min Xia
Sun Yat-Sen University
2023.01
13
Comprehensive Analysis of the Lysine Succinylome in Fish Oil Treated Prostate Cancer Cells
Life Science Alliance
Yifan Jiang, He, Haokai Ye, Qianhan Xu, Xiuyuan Chen, Ying Chen, Jianying Sun, Sonia Rocha, Mu Wang
Xi’an Jiaotong-Liverpool University
2023.11
14
Global acetylome profiling indicates EPA impedes but OA promotes prostate cancer motility through altered acetylation of PFN1 and FLNA
Proteomics
Chao He, Xiuyuan Chen, Ying Chen, Jianying Sun, Manting Qi, Sonia Rocha, Mu Wang
Xi’an Jiaotong-Liverpool University
2024.03
15
TMT-Based Quantitative Proteomic Profiling of Human Esophageal Cancer Cells Reveals the Potential Mechanism and Potential Therapeutic Targets Associated with Radio-Resistance
Proteomics – Clinical Applications
Gao, A, He, C, Chen, H, Liu, Q, Chen, Y, Sun, J, Wu, C, Pan, Y, Rocha, S, Wang, M, and Zhou, J
Xi’an Jiaotong-Liverpool University
2024.09
16
Translocational attenuation mediated by the PERK-SRP14 axis is a protective mechanism of unfolded protein response
Cell Reports
Y Liu, Y Gu, Y Chen, X Wang, G Zhou, J Li, M Wang, S Fang, Y Yang
China Regional Research Centre
2024.07
Projects
No.
Project
Funding name
Funding body
Period
1
A machine learning based method for virtual screening and optimization in multi-target drug discovery
Jiangsu Science and Technology Programme
Jiangsu Provincial Department of Science and Technology
2020.07-2024.06
2
Clinical Efficacy Observation and Mechanism Study of Stem Cell-Converted Dendrobium officinale in Treating G3b Pre-DKD
Suzhou Science and Technology Development Planning Programme
Suzhou Science and Technology Bureau
2023.04-2027.04
3
Suzhou AI-Driven New Drug Development Innovation Alliance
Suzhou Science and Technology Development Planning Programme
Suzhou Science and Technology Bureau
2023.07-2026.06
4
An investigation into the mechanism of cardiac repair using a combination of extracellular vesicles from stem cells and their derived cells
The Natural Science Foundation of the Jiangsu Higher Education Institutions of China
Jiangsu Education Department
2024.07-2026.07
5
Jiangsu Province Higher Education Key Laboratory of Cell Therapy Nanoformulation (Construction)
Provincial Key Lab of Jiangsu DoE
Jiangsu Education Department
2024.07-2027.06
6
An investigation into a novel gene therapy strategy using extracellular vesicles to encapsulate adeno-associated viruses, aimed at overcoming interference from pre-existing neutralizing antibodies
Jiangsu Science and Technology Programme
Jiangsu Provincial Department of Science and Technology
2024.09-2027.08
7
Design of self-assembly peptides by Human-in-the-Loop
Jiangsu Science and Technology Programme
Jiangsu Provincial Department of Science and Technology
2024.09-2027.08
8
Study on the mechanism of DMGV-induced functional impairment of pancreatic β-cell and early progression of type 2 diabetes
National Natural Science Foundation of China (NSFC)
National Natural Science Foundation of China
2025.01-2027.12
9
Mechanisms of extracellular vesicles derived from human pluripotent stem cells and their cardiac lineage cells for cardiac repair and enhancement of efficacy
National Natural Science Foundation of China (NSFC)
National Natural Science Foundation of China
2025.01-2027.12
10
The mechanism of ammonia accumulation promotes liver cancer progression via calcium channel-mTORC2-SREBP1-lipogenesis dependent manner
National Natural Science Foundation of China (NSFC)
National Natural Science Foundation of China
2025.01-2028.12
No.
Project
Collaborative companies
Period
Cooperation methods
1
XJTLU Wisdom Lake Academy of Pharmacy – Wosheng Pharmaceutical Joint Laboratory
Suzhou Wosheng Biopharmaceutical Co., Ltd.
4/15/2021- 4/14/2024
Scientific research cooperation
2
AI-based Drug Design and Virtual Screening
Suzhou Kintor Pharmaceuticals, INC.
9/30/2021- 8/31/2024
Scientific research cooperation
3
The Pharmacokinetics Research of using EPA in CDX (Cell-Derived Xenografts) Mouse Model
Jiangsu Yue-Kang Bio-Tech Co., Ltd.
1/10/2022- 1/10/2023
Scientific research cooperation
4
XJTLU Wisdom Lake Academy of Pharmacy – Beaver Biological Joint Science Laboratory
Publications
Projects
Patents